HL_9YQ1_042

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCAGAUCC

Length

10 nucleotides

Bulged bases

9YQ1|1|5|U|2530, 9YQ1|1|5|C|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|5|G|2523
9YQ1|1|5|U|2524
9YQ1|1|5|U|2525
9YQ1|1|5|C|2526
9YQ1|1|5|A|2527
9YQ1|1|5|G|2528
9YQ1|1|5|A|2529
9YQ1|1|5|U|2530
9YQ1|1|5|C|2531
9YQ1|1|5|C|2532

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein L19

Chain X

eL23

Chain g

Large ribosomal subunit protein eL34