HL_9YQ1_064

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUCAGUACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|5|U|4301
9YQ1|1|5|U|4302
9YQ1|1|5|C|4303
9YQ1|1|5|A|4304
9YQ1|1|5|G|4305
9YQ1|1|5|U|4306
9YQ1|1|5|A|4307
9YQ1|1|5|C|4308
9YQ1|1|5|G|4309

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Q

Ribosomal protein L18

Chain T

eL21

Chain a

60S ribosomal protein L27a

Chain o

Large ribosomal subunit protein eL42