HL_9YQ1_098

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

9YQ1|1|9|G|891

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|9|U|885
9YQ1|1|9|A|886
9YQ1|1|9|U|887
9YQ1|1|9|U|888
9YQ1|1|9|U|889
9YQ1|1|9|U|890
9YQ1|1|9|G|891
9YQ1|1|9|U|892
9YQ1|1|9|U|893
9YQ1|1|9|G|894
9YQ1|1|9|G|895
9YQ1|1|9|U|896
9YQ1|1|9|U|897
9YQ1|1|9|U|898
9YQ1|1|9|U|899
9YQ1|1|9|C|900
9YQ1|1|9|G|901

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain LL

Ribosomal protein S11