HL_9ZGN_008

3D structure

PDB id

9ZGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAAAUGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZGN_008 not in the Motif Atlas

Geometric match to HL_2A64_005

Geometric discrepancy: 0.2625

The information below is about HL_2A64_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48408.1

Basepair signature

cWW-tSH-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9ZGN|1|A|G|288
9ZGN|1|A|G|289
9ZGN|1|A|A|290
9ZGN|1|A|A|291
9ZGN|1|A|A|292
9ZGN|1|A|U|293
9ZGN|1|A|G|294
9ZGN|1|A|A|295
9ZGN|1|A|A|296
9ZGN|1|A|C|297

Current chains

Chain A

RNase P RNA

Nearby chains