HL_9ZGU_004

3D structure

PDB id

9ZGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 12

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9ZGU|1|A|U|125, 9ZGU|1|A|C|126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZGU_004 not in the Motif Atlas

Geometric match to HL_8S95_003

Geometric discrepancy: 0.3704

The information below is about HL_8S95_003

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_34080.1

Basepair signature

cWW-cWH-F

Number of instances in this motif group

4

Unit IDs

9ZGU|1|A|C|123
9ZGU|1|A|U|124
9ZGU|1|A|U|125
9ZGU|1|A|C|126
9ZGU|1|A|G|127
9ZGU|1|A|G|128

Current chains

Chain A

RNase P RNA

Nearby chains