HL_9ZH2_005

3D structure

PDB id

9ZH2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 20

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGCUG

Length

6 nucleotides

Bulged bases

9ZH2|1|A|C|163

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZH2_005 not in the Motif Atlas

Geometric match to HL_8G9Z_003

Geometric discrepancy: 0.3503

The information below is about HL_8G9Z_003

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

9ZH2|1|A|C|160
9ZH2|1|A|G|161
9ZH2|1|A|G|162
9ZH2|1|A|C|163
9ZH2|1|A|U|164
9ZH2|1|A|G|165

Current chains

Chain A

RNase P RNA

Nearby chains