HL_9ZI7_005

3D structure

PDB id

9ZI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 54

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGCUGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZI7_005 not in the Motif Atlas

Geometric match to HL_3IVK_005

Geometric discrepancy: 0.3842

The information below is about HL_3IVK_005

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_67772.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

9ZI7|1|A|C|160
9ZI7|1|A|G|161
9ZI7|1|A|G|162
9ZI7|1|A|C|163
9ZI7|1|A|U|164
9ZI7|1|A|G|165
9ZI7|1|A|G|166

Current chains

Chain A

RNase P RNA

Nearby chains