HL_9ZIB_006

3D structure

PDB id

9ZIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CACAGUGACGGAGCUCUAAGGGAAACCUUAGAGGUGGAACGCG

Length

43 nucleotides

Bulged bases

9ZIB|1|A|A|197, 9ZIB|1|A|A|216, 9ZIB|1|A|A|217, 9ZIB|1|A|C|220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIB|1|A|C|194
9ZIB|1|A|A|195
9ZIB|1|A|C|196
9ZIB|1|A|A|197
9ZIB|1|A|G|198
9ZIB|1|A|U|199
9ZIB|1|A|G|200
9ZIB|1|A|A|201
9ZIB|1|A|C|202
9ZIB|1|A|G|203
9ZIB|1|A|G|204
9ZIB|1|A|A|205
9ZIB|1|A|G|206
9ZIB|1|A|C|207
9ZIB|1|A|U|208
9ZIB|1|A|C|209
9ZIB|1|A|U|210
9ZIB|1|A|A|211
9ZIB|1|A|A|212
9ZIB|1|A|G|213
9ZIB|1|A|G|214
9ZIB|1|A|G|215
9ZIB|1|A|A|216
9ZIB|1|A|A|217
9ZIB|1|A|A|218
9ZIB|1|A|C|219
9ZIB|1|A|C|220
9ZIB|1|A|U|221
9ZIB|1|A|U|222
9ZIB|1|A|A|223
9ZIB|1|A|G|224
9ZIB|1|A|A|225
9ZIB|1|A|G|226
9ZIB|1|A|G|227
9ZIB|1|A|U|228
9ZIB|1|A|G|229
9ZIB|1|A|G|230
9ZIB|1|A|A|231
9ZIB|1|A|A|232
9ZIB|1|A|C|233
9ZIB|1|A|G|234
9ZIB|1|A|C|235
9ZIB|1|A|G|236

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains