HL_9ZID_001

3D structure

PDB id

9ZID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUUC

Length

6 nucleotides

Bulged bases

9ZID|1|A|U|34, 9ZID|1|A|U|35

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZID_001 not in the Motif Atlas

Geometric match to HL_7VTI_001

Geometric discrepancy: 0.381

The information below is about HL_7VTI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.4

Basepair signature

cWW-F-F

Number of instances in this motif group

20

Unit IDs

9ZID|1|A|G|31
9ZID|1|A|G|32
9ZID|1|A|U|33
9ZID|1|A|U|34
9ZID|1|A|U|35
9ZID|1|A|C|36

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component