HL_9ZIJ_006

3D structure

PDB id

9ZIJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 11

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

9ZIJ|1|A|A|216

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZIJ_006 not in the Motif Atlas

Homologous match to HL_1NBS_007

Geometric discrepancy: 0.3701

The information below is about HL_1NBS_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9ZIJ|1|A|G|214
9ZIJ|1|A|G|215
9ZIJ|1|A|A|216
9ZIJ|1|A|A|217
9ZIJ|1|A|A|218
9ZIJ|1|A|C|219

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains