HL_9ZIN_008

3D structure

PDB id

9ZIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 15

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

GGAAAUGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZIN_008 not in the Motif Atlas

Geometric match to HL_2A64_005

Geometric discrepancy: 0.2908

The information below is about HL_2A64_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48408.1

Basepair signature

cWW-tSH-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9ZIN|1|A|G|288
9ZIN|1|A|G|289
9ZIN|1|A|A|290
9ZIN|1|A|A|291
9ZIN|1|A|A|292
9ZIN|1|A|U|293
9ZIN|1|A|G|294
9ZIN|1|A|A|295
9ZIN|1|A|A|296
9ZIN|1|A|C|297

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains