HL_9ZIN_010

3D structure

PDB id

9ZIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 15

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CGCAAAG

Length

7 nucleotides

Bulged bases

9ZIN|1|A|C|361

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZIN_010 not in the Motif Atlas

Geometric match to HL_4WF9_059

Geometric discrepancy: 0.3719

The information below is about HL_4WF9_059

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9ZIN|1|A|C|359
9ZIN|1|A|G|360
9ZIN|1|A|C|361
9ZIN|1|A|A|362
9ZIN|1|A|A|363
9ZIN|1|A|A|364
9ZIN|1|A|G|365

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains