HL_9ZIV_005

3D structure

PDB id

9ZIV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 17

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGCUGG

Length

7 nucleotides

Bulged bases

9ZIV|1|A|C|163

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZIV_005 not in the Motif Atlas

Geometric match to HL_4PQV_003

Geometric discrepancy: 0.3312

The information below is about HL_4PQV_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61768.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9ZIV|1|A|C|160
9ZIV|1|A|G|161
9ZIV|1|A|G|162
9ZIV|1|A|C|163
9ZIV|1|A|U|164
9ZIV|1|A|G|165
9ZIV|1|A|G|166

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains