HL_9ZIX_006

3D structure

PDB id

9ZIX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 20

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZIX_006 not in the Motif Atlas

Homologous match to HL_1NBS_007

Geometric discrepancy: 0.2577

The information below is about HL_1NBS_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9ZIX|1|A|G|214
9ZIX|1|A|G|215
9ZIX|1|A|A|216
9ZIX|1|A|A|217
9ZIX|1|A|A|218
9ZIX|1|A|C|219

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains