HL_9ZN2_035

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9ZN2|1|A|A|1535, 9ZN2|1|A|C|1536

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZN2_035 not in the Motif Atlas

Homologous match to HL_8B0X_066

Geometric discrepancy: 0.482

The information below is about HL_8B0X_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9ZN2|1|A|C|1533
9ZN2|1|A|U|1534
9ZN2|1|A|A|1535
9ZN2|1|A|C|1536
9ZN2|1|A|G|1537
9ZN2|1|A|G|1538

Current chains

Chain A

23S Ribosomal RNA

Nearby chains