HL_9ZTL_008

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

9ZTL|1|A|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_008 not in the Motif Atlas

Homologous match to HL_6CZR_077

Geometric discrepancy: 0.3216

The information below is about HL_6CZR_077

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9ZTL|1|A|G|259
9ZTL|1|A|G|260
9ZTL|1|A|U|261
9ZTL|1|A|A|262
9ZTL|1|A|A|263
9ZTL|1|A|C|264
9ZTL|1|A|G|265
9ZTL|1|A|G|266
9ZTL|1|A|C|267

Current chains

Chain A

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S17

Chain T

30S ribosomal protein S20