HL_9ZTL_010

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

9ZTL|1|A|C|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_010 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1761

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9ZTL|1|A|A|320
9ZTL|1|A|A|321
9ZTL|1|A|C|322
9ZTL|1|A|U|323
9ZTL|1|A|G|324
9ZTL|1|A|A|325
9ZTL|1|A|G|326
9ZTL|1|A|A|327
9ZTL|1|A|C|328
9ZTL|1|A|A|329
9ZTL|1|A|C|330
9ZTL|1|A|G|331
9ZTL|1|A|G|332
9ZTL|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20