3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
ACACGUGGUAU
Length
11 nucleotides
Bulged bases
9ZTL|1|a|G|386
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9ZTL_045 not in the Motif Atlas
Homologous match to HL_7A0S_013
Geometric discrepancy: 0.3317
The information below is about HL_7A0S_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91503.8
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

9ZTL|1|a|A|382
9ZTL|1|a|C|383
9ZTL|1|a|A|384
9ZTL|1|a|C|385
9ZTL|1|a|G|386
9ZTL|1|a|U|387
9ZTL|1|a|G|388
9ZTL|1|a|G|389
9ZTL|1|a|U|390
9ZTL|1|a|A|391
9ZTL|1|a|U|392

Current chains

Chain a
23s rRNA

Nearby chains

Chain w
50S ribosomal protein L28

Coloring options:


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