HL_9ZTL_059

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

9ZTL|1|a|U|958, 9ZTL|1|a|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_059 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.2176

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9ZTL|1|a|PSU|955
9ZTL|1|a|G|956
9ZTL|1|a|C|957
9ZTL|1|a|U|958
9ZTL|1|a|A|959
9ZTL|1|a|A|960
9ZTL|1|a|C|961
9ZTL|1|a|G|962

Current chains

Chain a

23s rRNA

Nearby chains

Chain b

5S ribosomal RNA; 5S rRNA

Chain l

50S ribosomal protein L16