HL_9ZTL_060

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_060 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.2565

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

9ZTL|1|a|G|978
9ZTL|1|a|A|979
9ZTL|1|a|A|980
9ZTL|1|a|A|981
9ZTL|1|a|C|982
9ZTL|1|a|A|983
9ZTL|1|a|A|984
9ZTL|1|a|C|985

Current chains

Chain a

23s rRNA

Nearby chains

Chain p

50S ribosomal protein L20

Chain q

50S ribosomal protein L21