HL_9ZTL_084

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_084 not in the Motif Atlas

Geometric match to HL_8B0X_101

Geometric discrepancy: 0.1213

The information below is about HL_8B0X_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02452.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9ZTL|1|a|G|2304
9ZTL|1|a|U|2305
9ZTL|1|a|C|2306
9ZTL|1|a|G|2307
9ZTL|1|a|G|2308
9ZTL|1|a|A|2309
9ZTL|1|a|C|2310
9ZTL|1|a|A|2311
9ZTL|1|a|U|2312

Current chains

Chain a

23s rRNA

Nearby chains

Chain f

50S ribosomal protein L5