IL_10FZ_011

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGG*CGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_10FZ_011 not in the Motif Atlas

Geometric match to IL_3CZW_001

Geometric discrepancy: 0.1141

The information below is about IL_3CZW_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

61

Unit IDs

10FZ|1|A|G|144
10FZ|1|A|G|145
10FZ|1|A|G|146
*
10FZ|1|A|C|176
10FZ|1|A|G|177
10FZ|1|A|C|178

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20