IL_10MF_001
3D structure
- PDB id
- 10MF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CBR9379 bound Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AAGAGA*TCTCT
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
10MF|1|A|DA|20
10MF|1|A|DA|21
10MF|1|A|DG|22
10MF|1|A|DA|23
10MF|1|A|DG|24
10MF|1|A|DA|25
*
10MF|1|B|DT|8
10MF|1|B|DC|9
10MF|1|B|DT|10
10MF|1|B|DC|11
10MF|1|B|DT|12
Current chains
- Chain A
- non-template DNA
- Chain B
- template DNA
Nearby chains
- Chain I
- DNA-directed RNA polymerase subunit beta
- Chain J
- DNA-directed RNA polymerase subunit beta'
Coloring options: