IL_10PX_085

3D structure

PDB id

10PX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.45 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

10PX|1|1A|U|2132, 10PX|1|1A|A|2135

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10PX|1|1A|C|2129
10PX|1|1A|U|2130
10PX|1|1A|G|2131
10PX|1|1A|U|2132
10PX|1|1A|G|2133
10PX|1|1A|A|2134
10PX|1|1A|A|2135
10PX|1|1A|C|2136
10PX|1|1A|C|2137
*
10PX|1|1A|G|2154
10PX|1|1A|G|2155
10PX|1|1A|G|2156
10PX|1|1A|G|2157
10PX|1|1A|A|2158
10PX|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains