IL_10QM_013
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_10QM_013 not in the Motif Atlas
- Homologous match to IL_7A0S_011
- Geometric discrepancy: 0.1105
- The information below is about IL_7A0S_011
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01334.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 23
Unit IDs
10QM|1|I|C|564
10QM|1|I|C|565
10QM|1|I|U|566
*
10QM|1|I|A|575
10QM|1|I|U|576
10QM|1|I|G|577
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain M
- Large ribosomal subunit protein uL4
- Chain T
- Large ribosomal subunit protein uL15
- Chain Y
- 50S ribosomal protein L20
- Chain Z
- Ribosomal protein L21
- Chain i
- 50S ribosomal protein L32
Coloring options: