IL_10QM_039

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

10QM|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|C|1043
10QM|1|I|C|1044
10QM|1|I|C|1045
10QM|1|I|A|1046
10QM|1|I|G|1047
10QM|1|I|A|1048
10QM|1|I|C|1049
10QM|1|I|A|1050
10QM|1|I|G|1051
10QM|1|I|C|1052
10QM|1|I|C|1053
*
10QM|1|I|G|1106
10QM|1|I|G|1107
10QM|1|I|U|1108
10QM|1|I|C|1109
10QM|1|I|G|1110
10QM|1|I|A|1111
10QM|1|I|G|1112

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL6

Chain m

50S ribosomal protein L36