IL_10QM_060

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GAA*UCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_10QM_060 not in the Motif Atlas

Homologous match to IL_7A0S_060

Geometric discrepancy: 0.117

The information below is about IL_7A0S_060

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_10432.3

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

11

Unit IDs

10QM|1|I|G|1663
10QM|1|I|A|1664
10QM|1|I|A|1665
*
10QM|1|I|U|1995
10QM|1|I|C|1996
10QM|1|I|C|1997

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain S

Large ribosomal subunit protein uL14

Chain X

Large ribosomal subunit protein bL19