IL_10QM_083

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GAGCCUUGAUG*CUUUAAUGUUU

Length

22 nucleotides

Bulged bases

10QM|1|I|U|2109

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|G|2100
10QM|1|I|A|2101
10QM|1|I|G|2102
10QM|1|I|C|2103
10QM|1|I|C|2104
10QM|1|I|U|2105
10QM|1|I|U|2106
10QM|1|I|G|2107
10QM|1|I|A|2108
10QM|1|I|U|2109
10QM|1|I|G|2110
*
10QM|1|I|C|2179
10QM|1|I|U|2180
10QM|1|I|U|2181
10QM|1|I|U|2182
10QM|1|I|A|2183
10QM|1|I|A|2184
10QM|1|I|U|2185
10QM|1|I|G|2186
10QM|1|I|U|2187
10QM|1|I|U|2188
10QM|1|I|U|2189

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain P

Large ribosomal subunit protein bL9