3D structure

PDB id
10ZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Yeast co-transcriptional pre-60S assembly intermediate Pwp1 RNP
Experimental method
ELECTRON MICROSCOPY
Resolution
2.74 Å

Loop

Sequence
AU*AGUUGU
Length
8 nucleotides
Bulged bases
10ZY|1|1|U|147
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

10ZY|1|1|A|123
10ZY|1|1|U|124
*
10ZY|1|1|A|144
10ZY|1|1|G|145
10ZY|1|1|U|146
10ZY|1|1|U|147
10ZY|1|1|G|148
10ZY|1|1|U|149

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain G
60S ribosomal protein L8-A
Chain N
60S ribosomal protein L15-A
Chain R
Periodic tryptophan protein 1

Coloring options:

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