IL_11BQ_032

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAGAG*UGGAC

Length

11 nucleotides

Bulged bases

11BQ|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|A|G|661
11BQ|1|A|U|662
11BQ|1|A|A|663
11BQ|1|A|G|664
11BQ|1|A|A|665
11BQ|1|A|G|666
*
11BQ|1|A|U|740
11BQ|1|A|G|741
11BQ|1|A|G|742
11BQ|1|A|A|743
11BQ|1|A|C|744

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain F

Small ribosomal subunit protein bS6

Chain O

Small ribosomal subunit protein uS15

Chain R

Small ribosomal subunit protein bS18

Chain U

Small ribosomal subunit protein bS21