3D structure

PDB id
11BQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAG*UGUGCCUUCGGGAAC
Length
19 nucleotides
Bulged bases
11BQ|1|A|C|1031
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

11BQ|1|A|G|1003
11BQ|1|A|A|1004
11BQ|1|A|A|1005
11BQ|1|A|G|1006
*
11BQ|1|A|U|1023
11BQ|1|A|G|1024
11BQ|1|A|U|1025
11BQ|1|A|G|1026
11BQ|1|A|C|1027
11BQ|1|A|C|1028
11BQ|1|A|U|1029
11BQ|1|A|U|1030
11BQ|1|A|C|1031
11BQ|1|A|G|1032
11BQ|1|A|G|1033
11BQ|1|A|G|1034
11BQ|1|A|A|1035
11BQ|1|A|A|1036
11BQ|1|A|C|1037

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain C
30S ribosomal protein S3
Chain N
Small ribosomal subunit protein uS14

Coloring options:

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