IL_11BQ_097
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 11BQ|1|a|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11BQ_097 not in the Motif Atlas
- Homologous match to IL_7A0S_032
- Geometric discrepancy: 0.1507
- The information below is about IL_7A0S_032
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 67
Unit IDs
11BQ|1|a|C|994
11BQ|1|a|C|995
11BQ|1|a|A|996
*
11BQ|1|a|U|1159
11BQ|1|a|G|1160
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain i
- Large ribosomal subunit protein uL13
- Chain p
- 50S ribosomal protein L20
- Chain q
- Large ribosomal subunit protein bL21
- Chain y
- 50S ribosomal protein L30
Coloring options: