IL_11BQ_107

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

11BQ|1|a|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|a|G|1202
11BQ|1|a|U|1203
11BQ|1|a|A|1204
11BQ|1|a|A|1205
11BQ|1|a|G|1206
*
11BQ|1|a|U|1240
11BQ|1|a|A|1241
11BQ|1|a|U|1242
11BQ|1|a|C|1243

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain k

Large ribosomal subunit protein uL15