IL_11FV_032
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_032 not in the Motif Atlas
- Homologous match to IL_6CZR_409
- Geometric discrepancy: 0.1476
- The information below is about IL_6CZR_409
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
11FV|1|C|G|667
11FV|1|C|G|668
11FV|1|C|A|669
11FV|1|C|A|670
11FV|1|C|U|671
*
11FV|1|C|G|707
11FV|1|C|G|708
11FV|1|C|A|709
11FV|1|C|A|710
11FV|1|C|C|711
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein bS21
- Chain H
- Small ribosomal subunit protein bS6
- Chain K
- 50S ribosomal protein L2
- Chain r
- 30S ribosomal protein S11
- Chain z
- Small ribosomal subunit protein bS18
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