IL_11FV_051

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUACAAAG*CAUAAAAC

Length

16 nucleotides

Bulged bases

11FV|1|C|U|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|C|G|1240
11FV|1|C|U|1241
11FV|1|C|A|1242
11FV|1|C|C|1243
11FV|1|C|A|1244
11FV|1|C|A|1245
11FV|1|C|A|1246
11FV|1|C|G|1247
*
11FV|1|C|C|1278
11FV|1|C|A|1279
11FV|1|C|U|1280
11FV|1|C|A|1281
11FV|1|C|A|1282
11FV|1|C|A|1283
11FV|1|C|A|1284
11FV|1|C|C|1285

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain n

Small ribosomal subunit protein uS7

Chain p

Small ribosomal subunit protein uS9

Chain q

Small ribosomal subunit protein uS10