IL_11FV_089

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UC*GAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11FV_089 not in the Motif Atlas

Geometric match to IL_8B0X_089

Geometric discrepancy: 0.088

The information below is about IL_8B0X_089

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

11FV|1|I|U|850
11FV|1|I|C|851
*
11FV|1|I|G|926
11FV|1|I|A|927
11FV|1|I|A|928

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain h

50S ribosomal protein L30