IL_11FV_105

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCAGACAGCC*GGUCGAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|C|1044
11FV|1|I|C|1045
11FV|1|I|A|1046
11FV|1|I|G|1047
11FV|1|I|A|1048
11FV|1|I|C|1049
11FV|1|I|A|1050
11FV|1|I|G|1051
11FV|1|I|C|1052
11FV|1|I|C|1053
*
11FV|1|I|G|1106
11FV|1|I|G|1107
11FV|1|I|U|1108
11FV|1|I|C|1109
11FV|1|I|G|1110
11FV|1|I|A|1111
11FV|1|I|G|1112

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL6