IL_11FV_150

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC

Length

33 nucleotides

Bulged bases

11FV|1|I|G|2125, 11FV|1|I|U|2131, 11FV|1|I|U|2132, 11FV|1|I|A|2163, 11FV|1|I|C|2164, 11FV|1|I|G|2168, 11FV|1|I|A|2169

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|G|2124
11FV|1|I|G|2125
11FV|1|I|A|2126
11FV|1|I|G|2127
11FV|1|I|G|2128
11FV|1|I|C|2129
11FV|1|I|U|2130
11FV|1|I|U|2131
11FV|1|I|U|2132
11FV|1|I|G|2133
11FV|1|I|A|2134
11FV|1|I|A|2135
11FV|1|I|G|2136
*
11FV|1|I|U|2155
11FV|1|I|G|2156
11FV|1|I|G|2157
11FV|1|I|A|2158
11FV|1|I|G|2159
11FV|1|I|C|2160
11FV|1|I|C|2161
11FV|1|I|G|2162
11FV|1|I|A|2163
11FV|1|I|C|2164
11FV|1|I|C|2165
11FV|1|I|U|2166
11FV|1|I|U|2167
11FV|1|I|G|2168
11FV|1|I|A|2169
11FV|1|I|A|2170
11FV|1|I|A|2171
11FV|1|I|U|2172
11FV|1|I|A|2173
11FV|1|I|C|2174

Current chains

Chain I

23S ribosomal RNA

Nearby chains