IL_11HE_148
3D structure
- PDB id
- 11HE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV closed
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CCC*GG
- Length
- 5 nucleotides
- Bulged bases
- 11HE|1|28|C|4772
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HE_148 not in the Motif Atlas
- Geometric match to IL_9E6Q_038
- Geometric discrepancy: 0.386
- The information below is about IL_9E6Q_038
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 67
Unit IDs
11HE|1|28|C|4771
11HE|1|28|C|4772
11HE|1|28|C|4773
*
11HE|1|28|G|4862
11HE|1|28|G|4863
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain L9
- 60S ribosomal protein L9
- Chain bb
- Large ribosomal subunit protein uL13
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