IL_11HG_002

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCUCAAA*UGACGAAA

Length

15 nucleotides

Bulged bases

11HG|1|18|A|516

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|18|U|34
11HG|1|18|C|35
11HG|1|18|U|36
11HG|1|18|C|37
11HG|1|18|A|38
11HG|1|18|A|39
11HG|1|18|A|40
*
11HG|1|18|U|514
11HG|1|18|G|515
11HG|1|18|A|516
11HG|1|18|C|517
11HG|1|18|G|518
11HG|1|18|A|519
11HG|1|18|A|520
11HG|1|18|A|521

Current chains

Chain 18

18S rRNA

Nearby chains

Chain S4

40S ribosomal protein S4

Chain S9

40S ribosomal protein S9