IL_11HG_028
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_028 not in the Motif Atlas
- Homologous match to IL_9H3G_188
- Geometric discrepancy: 0.1147
- The information below is about IL_9H3G_188
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
11HG|1|18|C|663
11HG|1|18|A|664
11HG|1|18|G|665
*
11HG|1|18|C|1162
11HG|1|18|C|1163
11HG|1|18|G|1164
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain RR
- uS12
- Chain S2
- 40S ribosomal protein S2
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