IL_11HG_037
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_037 not in the Motif Atlas
- Homologous match to IL_9H3G_194
- Geometric discrepancy: 0.3212
- The information below is about IL_9H3G_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.5
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
11HG|1|18|G|807
11HG|1|18|A|808
11HG|1|18|A|809
11HG|1|18|A|810
11HG|1|18|A|811
11HG|1|18|A|812
11HG|1|18|A|813
11HG|1|18|U|814
11HG|1|18|U|815
*
11HG|1|18|A|849
11HG|1|18|C|850
11HG|1|18|C|851
11HG|1|18|G|852
11HG|1|18|C|853
11HG|1|18|A|854
11HG|1|18|G|855
11HG|1|18|C|856
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain DD
- Small ribosomal subunit protein uS17
- Chain S4
- 40S ribosomal protein S4
- Chain S9
- 40S ribosomal protein S9
- Chain WX
- 40S ribosomal protein S15a
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