IL_11HG_043
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 11HG|1|18|G|933
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_043 not in the Motif Atlas
- Homologous match to IL_9PN5_185
- Geometric discrepancy: 0.1877
- The information below is about IL_9PN5_185
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
11HG|1|18|C|931
11HG|1|18|G|932
11HG|1|18|G|933
11HG|1|18|G|934
11HG|1|18|G|935
*
11HG|1|18|C|1007
11HG|1|18|A|1008
11HG|1|18|A|1009
11HG|1|18|G|1010
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain 30
- 60S ribosomal protein L30
- Chain AS
- 40S ribosomal protein S3a
- Chain FF
- 40S ribosomal protein S13
- Chain UU
- eS26
Coloring options: