IL_11HG_065

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGAGCGAUUUGUC*GAUAA

Length

19 nucleotides

Bulged bases

11HG|1|18|A|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|18|U|1350
11HG|1|18|G|1351
11HG|1|18|G|1352
11HG|1|18|A|1353
11HG|1|18|G|1354
11HG|1|18|C|1355
11HG|1|18|G|1356
11HG|1|18|A|1357
11HG|1|18|U|1358
11HG|1|18|U|1359
11HG|1|18|U|1360
11HG|1|18|G|1361
11HG|1|18|U|1362
11HG|1|18|C|1363
*
11HG|1|18|G|1375
11HG|1|18|A|1376
11HG|1|18|U|1377
11HG|1|18|A|1378
11HG|1|18|A|1379

Current chains

Chain 18

18S rRNA

Nearby chains

Chain BB

40S_SA_C domain-containing protein

Chain PP

eS21

Chain RS

40S ribosomal protein S17

Chain S2

40S ribosomal protein S2