IL_11HG_070
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC
- Length
- 34 nucleotides
- Bulged bases
- 11HG|1|18|C|1553, 11HG|1|18|A|1580, 11HG|1|18|C|1581, 11HG|1|18|U|1585, 11HG|1|18|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HG|1|18|G|1541
11HG|1|18|C|1542
11HG|1|18|U|1543
11HG|1|18|C|1544
11HG|1|18|A|1545
11HG|1|18|G|1546
11HG|1|18|C|1547
11HG|1|18|G|1548
11HG|1|18|U|1549
11HG|1|18|G|1550
11HG|1|18|U|1551
11HG|1|18|G|1552
11HG|1|18|C|1553
11HG|1|18|C|1554
11HG|1|18|U|1555
11HG|1|18|A|1556
11HG|1|18|C|1557
11HG|1|18|C|1558
*
11HG|1|18|G|1577
11HG|1|18|U|1578
11HG|1|18|A|1579
11HG|1|18|A|1580
11HG|1|18|C|1581
11HG|1|18|C|1582
11HG|1|18|C|1583
11HG|1|18|G|1584
11HG|1|18|U|1585
11HG|1|18|U|1586
11HG|1|18|G|1587
11HG|1|18|A|1588
11HG|1|18|A|1589
11HG|1|18|C|1590
11HG|1|18|C|1591
11HG|1|18|C|1592
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S10
- Chain II
- Small ribosomal subunit protein uS9
- Chain MM
- Small ribosomal subunit protein eS19
- Chain OO
- 40S ribosomal protein S20
- Chain S3
- Small ribosomal subunit protein uS3
- Chain S5
- Small ribosomal subunit protein uS7
- Chain TT
- 40S ribosomal protein S25
- Chain XX
- 40S ribosomal protein S29
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