IL_11HG_072

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|18|G|1604
11HG|1|18|G|1605
11HG|1|18|G|1606
11HG|1|18|A|1607
11HG|1|18|U|1608
11HG|1|18|C|1609
11HG|1|18|G|1610
*
11HG|1|18|C|1629
11HG|1|18|A|1630
11HG|1|18|U|1631
11HG|1|18|G|1632
11HG|1|18|A|1633
11HG|1|18|A|1634
11HG|1|18|C|1635

Current chains

Chain 18

18S rRNA

Nearby chains

Chain LL

40S ribosomal protein S18

Chain MM

Small ribosomal subunit protein eS19

Chain S5

Small ribosomal subunit protein uS7