IL_11HG_108

3D structure

PDB id

11HG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

11HG|1|28|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HG|1|28|A|466
11HG|1|28|U|467
11HG|1|28|U|468
11HG|1|28|C|469
11HG|1|28|A|470
11HG|1|28|A|471
11HG|1|28|C|472
*
11HG|1|28|G|682
11HG|1|28|C|683
11HG|1|28|G|684
11HG|1|28|C|685
11HG|1|28|A|686
11HG|1|28|U|687
11HG|1|28|U|688
11HG|1|28|U|689

Current chains

Chain 28

28s rRNA

Nearby chains

Chain L6

Large ribosomal subunit protein eL6

Chain gg

60S ribosomal protein L28