IL_11HG_144
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_144 not in the Motif Atlas
- Homologous match to IL_9H3G_040
- Geometric discrepancy: 0.1022
- The information below is about IL_9H3G_040
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 81
Unit IDs
11HG|1|28|U|1671
11HG|1|28|U|1672
11HG|1|28|U|1673
*
11HG|1|28|A|1682
11HG|1|28|U|1683
11HG|1|28|A|1684
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 13
- 60S ribosomal protein L13
- Chain 21
- 60S ribosomal protein L21
- Chain 29
- Large ribosomal subunit protein eL29
- Chain Q
- Large ribosomal subunit protein eL18
- Chain dd
- 60S ribosomal protein L27a
Coloring options: