IL_11HG_168
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 11HG|1|28|G|2343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_168 not in the Motif Atlas
- Homologous match to IL_8GLP_084
- Geometric discrepancy: 0.065
- The information below is about IL_8GLP_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84227.2
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 20
Unit IDs
11HG|1|28|C|2290
11HG|1|28|G|2291
11HG|1|28|C|2292
*
11HG|1|28|G|2342
11HG|1|28|G|2343
11HG|1|28|U|2344
11HG|1|28|G|2345
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain 58
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L4
- 60S ribosomal protein L4
- Chain dd
- 60S ribosomal protein L27a
- Chain gg
- 60S ribosomal protein L28
Coloring options: