IL_11HG_242
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCGUACG*UUGAAA
- Length
- 13 nucleotides
- Bulged bases
- 11HG|1|28|G|5041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_242 not in the Motif Atlas
- Homologous match to IL_8GLP_176
- Geometric discrepancy: 0.0694
- The information below is about IL_8GLP_176
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HG|1|28|U|5003
11HG|1|28|C|5004
11HG|1|28|G|5005
11HG|1|28|U|5006
11HG|1|28|A|5007
11HG|1|28|C|5008
11HG|1|28|G|5009
*
11HG|1|28|U|5039
11HG|1|28|U|5040
11HG|1|28|G|5041
11HG|1|28|A|5042
11HG|1|28|A|5043
11HG|1|28|A|5044
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 31
- 60S ribosomal protein L31
- Chain L3
- 60S ribosomal protein L3
- Chain W
- Ribosomal protein L24
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